Description of files in
http://www.jaist.ac.jp/~h-pham/regulation/
This web site contains supplementary files of the paper:
@article{Pham04,
author = {T.H. Pham
and K. Satou and T.B. Ho},
year = 2004,
title = {Mining yeast
transcriptional regulatory modules from factor DNA-binding sites and gene
expression data},
journal = {Genome Informatics, GIW2004},
volume ={15(2)},
pages ={287-295}
}
A brief description of files are
below. Please see the above paper for
more details.
-------------------
:
List closed inf-TRMs and closed
sup-TRMs, respectively, with support>=5 and similar_satio>=0.5 found by our method
-------------------
:
List of TRMs overlapped between
the set of closed inf-TRMs and the set of closed sup-TRMs
-------------------
:
List of TRMs very similar to
gene modules found by GRAM
-------------------
:
Revision process of all candidate closed inf-TRMs and closed sup-TRMs, respectively