The system is managed by the scheduler.
Please refer to the parallel server user manual for basic submitting jobs.
Making a job script
To execute a compiled executable file as a batch job, you need a job script to submit to the job scheduler.
Job Script
Please refer to following link．
After logon to kagayaki, sample script files can be found in the path below. Please copy it to your own directory before using．
kagayaki: /Samples
Job submission
1. Submit the job script to the scheduler as below.
% qsub -q <Queue> <Script>
2. Job submission (with mail notification)
Notification of the starting / ending the job can be requested as below,
% qsub -q <Queue> -M <mail address> -m be <Script>
-M <contact email>
-m be # b -> begin(Job starting) , e -> end(Job ending)
3. Job deletion
Only the owner of the job can delete his already submitted jobs
% qdel <Job id>
Queue classes
For Single Node: (Default Chunk Size：16CPU+64GB)
| Queue | Size | Core | Memory | Walltime | Number of Simultaneous Job | Number of Simultaneous Job(per User) |
|---|---|---|---|---|---|---|
| TINY | ~1/8node | ~16core | ~64GB | 30min | 90job | 16job |
| DEFAULT | ~1/2node | ~64core | ~256GB | 1week | 300job | 15job |
| SINGLE | ~1node | ~128Core | ~512GB | 1week | 150job | 10job |
| LONG | ~1node | ~128Core | ~512GB | 3week | 30job | 2job |
For Multi Nodes:
| Queue | Core | Walltime | Number of Simultaneous Job | Number of Simultaneous Job(per User) |
|---|---|---|---|---|
| SMALL | ~640Core | 1week | 50job | 7job |
| LARGE | ~1536Core | 1week | 20job | 3job |
| XLARGE | ~4096Core | 5day | 7job | 1job |
| LONG-L | ~640Core | 2week | 10job | 1job |
- MPI is required for multi-node computation.
（The job will start without MPI, but the computation will be performed in the single node）
For GPU Nodes：
| Queue | Size | GPUs | GPU | Walltime |
| Number of Simultaneous Job(per User) | |
|---|---|---|---|---|---|---|---|
| GPU-1 | 0.5node | 1 | NVIDIA A40 | 7day | 30job | 4job | |
| GPU-S | 1node | 1-2 | NVIDIA A40 | 5day | 16job | 2job | |
| GPU-L | 1-4node | 1-8 | NVIDIA A40 | 3day | 2job | 1job | |
| GPU-1A | 0.5node | 1 | NVIDIA A100 | 7day | 20job | 2job | |
| GPU-LA | 1-4node | 1-8 | NVIDIA A100 | 3day | 2job | 1job |
VM node： *VM option is required for job submitting
| Queue | Size | GPUs | GPU | Walltime | Number of Simultaneous Job | Number of Simultaneous Job(per User) |
|---|---|---|---|---|---|---|
| VM-CPU | 1node | 1 | - | 7day | - | 4job |
| VM-GPU-S | 1node | 1/4 | NVIDIA H100 | 2day | - | 2job |
| VM-GPU-L | 1node | 1 | NVIDIA H100 | 2day | - | 1job |
| VM-LM | 1node | 1 | - | 7day | 1job | 1job |